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1.
IJB-Iranian Journal of Biotechnology. 2017; 15 (1): 42-49
in English | IMEMR | ID: emr-192440

ABSTRACT

Background: Plants have various defense mechanisms such as production of antimicrobial peptides, particularly pathogenesis related proteins [PR proteins]. PR10 family is an essential member of this group, with antifungal, antibacterial and antiviral activities


Objective: The goal of this study is to assess the antifungal activity of maize PR10 against some of fungal phytopathogens


Materials and Methods: Zea mays PR10 gene [TN-05-147] was cloned from genomic DNA and cDNA and overexpressed in Escherichia coli. The existence of a 77- bp intron and two exons in PR10 was confirmed by comparing the genomic and cDNA sequences. The PR10 cDNA was cloned in pET26b [+] expression vector and transformed into E. coli strain Rosetta DE3 in order to express PR10 recombinant protein. Expression of the recombinant protein was checked by western analysis. Recombinant PR10 appeared as insoluble inclusion bodies and thus solubilized and refolded. PR10 was isolated using Ni-NTA column. The activity of the refolded protein was confirmed by DNA degradation test. The antifungal activity of PR10 was assessed using radial diffusion, disc diffusion and spore germination. The hemolytic assay was performed to investigate the biosafety of recombinant PR10


Results: Recombinant maize PR10 exerted broad spectrum antifungal activity against Botrytis cinerea, Sclerotinia sclerotiorum, Fusarium oxysporum, Verticillium dahlia and Alternaria solani. Hemolysis biosafety test indicated that the protein is not poisonous to mammalian cells


Conclusions: Maize PR10 has the potential to be used as the antifungal agent against different fungal phytopathogens. Therefore, this protein can be used in order to produce antifungal agents and fungi resistance transgenic plants


Subject(s)
Antifungal Agents , Biological Assay , Gene Expression , Cloning, Molecular
2.
IJB-Iranian Journal of Biotechnology. 2015; 13 (3): 1-9
in English | IMEMR | ID: emr-179813

ABSTRACT

Background: selectable marker gene [SMG] systems are critical for generation of transgenic crops. Transgenic crop production without using SMG is not economically feasible. However, SMGs are non-essential once an intact transgenic plant has been established. Elimination of SMGs from transgenic crops both increases public acceptance of GM crops and prepares gene stacking possibility for improvement of complex traits. Synthetic inducible promoters provide an efficient and flexible strategy to regulate transgene expression


Objectives: this study aimed to construct a transformation vector based on Cre/loxP recombination system to enhance efficiency of SMG-free transgenic plant production followed by post-excision expression of gene of interest in transgenic plants by a pathogen inducible promoter


Materials and Methods: in pG-IPFFDD-cre[int]-gus[int] construct, cre recombinase and selectable marker gene [nptII] cassettes were placed between the two loxP recognition sites in direct orientation. Seed-specific Napin promoter was used for regulation of Cre expression in transgenic seeds. In the construct, loxP flanked sequence containing nptII and recombinase cassettes, located between a pathogen inducible promoter containing FFDD cis-acting elements and beta-glucuronidase coding region. The cunstuct was transformed into Nicotiana tabaccum via Agrobacterium-mediated transformation


Results: the results showed that both cre and nptII excision occurs in T1 progeny tobacco plants through seed-specific cre expression. The excisions were confirmed by methods activation of the gus gene, germination test on kanamycin-containing medium and molecular analysis. Inducibility of gus expression by FFDD-containing promoter in T1 leaf tissues was confirmed by histochemical Gus staining assay


Conclusions: the established system is not only an efficient tool for marker gene elimination but also provides possibility for inducible expression of the transgene

3.
IJB-Iranian Journal of Biotechnology. 2014; 12 (2): 26-31
in English | IMEMR | ID: emr-152820

ABSTRACT

Plant diseases, caused by a wide range of phytopathogenic fungi, could be managed using of Trichoderma sp, as a biocontrol agent. Cell wall degrading enzymes like chitinase from T. harzianum are important means for fungal pathogen inhibition. Overexpression of these chitinase enzymes can improve the antagonistic potential of Trichoderma sp. strains. This study aimed to produce a new enhanced biocontrol system of Trichoderma harzianum, overexpressing chit42 gene. The improved T. harzianum could be an appropriate biocontrol agent for controlling the stem rot disease of canola caused by Sclerotinia sclerotiorum. T. harzianum protoplast cotransformation was carried out by pLMRS3-Chit42 and p3SR2 plasmids. The transformants were selected based on their growth on colloidal chitin containing medium. The improvement of transformants was investigated by quantification of mRNA using real-time quantitative polymerase chain reaction [RT-PCR] and measurement of chitinase activity in the medium containing colloidal chitin as the carbon source. Furthermore, the antagonistic activity of transformants against S. sclerotiorum was assessed by dual culture experiments. The overexpressing transformants of Chit42 displayed higher levels of chitinase activity to inhibit S. sclerotiorum growth compared with the wild type. The results indicated that the value of the chitinase activity [126.42 + 0.07 U/mL] of Chit42-9 increased 64.17 fold. Transcriptomic analysis demonstrated that Chit42-9 transformant expressed 5.2 fold of Chit42 transcript as compared with the parent strain. Biocontrol inhibition of this transformant was 4.98-fold more compared with the non-transformant type. The improved Chit42-9 transformant can be used for biocontrolling S. sclerotiorum, cause of stem rot disease in canola

4.
IJB-Iranian Journal of Biotechnology. 2013; 11 (2): 89-95
in English | IMEMR | ID: emr-133105

ABSTRACT

Sugarcane is a monocotyledonous crop that is cultivated in the tropical and subtropical regions of the world. One of the most important criteria, influencing the efficiency of the sugarcane transformation is known to be related to physical and biological factors during the transformation procedure. The objective of this research was to study the response of callus induction and embryogenic callus production and to identify the major parameters controlling DNA delivery by particle bombardment into sugarcane [Saccharum officinarum L.] cv. NCo310. For callus induction and embryogenic callus production, leaf base segments were subjected to in vitro culture medium supplemented with two plant growth regulators [2,4-D and Dicamba]. Results showed that 1 mg.L -1 2,4-D was significantly influential in callus induction and embryogenic callus production. Considering both physical and biological factors, the efficiency of DNA [uidA gene] delivery was assessed by scoring transient GUS [gene [beta-glucuronidase]] expression in bombarded tissues. The highest transient GUS expression was obtained when callus was bombarded with the construct harboring rice Act1 promoter, and having 9 cm target distance, 25 inHg vacuum pressure, 1 microm gold particles, 12.5 micro g DNA per bombardment and one day pre-culture prior to the bombardment. A bombardment procedure suitable for elite sugarcane varieties was developed, which allowed high-efficiency DNA delivery combined with reduced damage to target tissues.


Subject(s)
Genes, Reporter , Bony Callus/embryology , Research
5.
IJB-Iranian Journal of Biotechnology. 2012; 10 (2): 87-95
in English | IMEMR | ID: emr-128992

ABSTRACT

Canola [Brassica napus L.] is an important oilseed crop. A serious problem in cultivation of this crop and yield loss, are due to fungal disease stem rot caused by Sclerotinia sclerotiorum. The pathogenesis-related [PR] proteins have the potential for enhancing resistance against fungal pathogen. Thaumatin-like proteins [TLPs] have been shown to have antifungal activity on various fungal pathogens. In this study, the tip gene isolated from cereal rye [Secale cereal L.] was introduced into canola plants. The amplified DMA fragment [about 500 bp] was analyzed and confirmed by restriction pattern and cloned into pUC19 and designated as pUCNG1. Comparison of the cloned fragment with the DNA sequence indicated that this gene contains no intron. The tip gene was predicted to encode a protein of 173 amino acids with an estimated molecular mass of 17.7 kDa. The deduced amino acid sequence of TIP showed a significant sequence identity with TLP from S.cereal and other plants. We used a transgenic over-expression approach in order to investigate anti-fungal activity of expressed TLP on Sclerotinia sclerotiorum. TLP was overexpressed under the CaMV35S constitutive promoter in [Brassica napus, R line Hyola 308]. Transformation of cotyledonary petioles was achieved via Agrobacterium tumefaciens LBA4404. The insertion of transgene was verified by the polymerase chain reaction [PCR] and genomic DMA dot blotting. Antifungal activity was detected in transgenic canola lines using detached leaf assay. The size of lesions induced by S. sclerotiorum in the leaves of transgenic canola was significantly retarded when compared to that detected in non-transgenic plants


Subject(s)
Brassica napus , Secale , Gene Expression , Plant Proteins , Ascomycota
6.
IJB-Iranian Journal of Biotechnology. 2011; 9 (1): 1-10
in English | IMEMR | ID: emr-122383

ABSTRACT

Sclerotinia sclerotiorum is a phytopathogenic fungus which causes serious yield losses in canola. A pathogen inducible-promoter can facilitate the production of Sclerotinia-resistant transgenic canola plants. In this study, the "gain of function approach" was adopted for the construction of a pathogen-inducible promoter. The synthetic promoter technique was used, which involved the insertion of the dimerized form of the cisacting element [F] upstream of the minimal CaMV 35S promoter, which drives the expression of the beta-glucronidase [GUS] gene. The pGFF construct containing this synthetic promoter [SynP-FF] was used for stable transformation of the canola plant. Fluorometric GUS expression analysis indicated that the SynP-FF promoter is responsive to methyl jasmonate and S. sclerotiorum treatments. The results of histochemical GUS expression patterns showed strong reporter expression in leaf, flower and stem tissues of canola. Hence, the SynP-FF synthetic promoter, carrying fungal pathogen-inducible features, could be considered as a valuable tool for controlling the expression of transgenes to improve resistance against the same lifestyle pathogens


Subject(s)
Fungal Proteins , Gene Expression , Glucuronidase , Microscopy, Electron, Scanning Transmission , Histocytochemistry
7.
IJB-Iranian Journal of Biotechnology. 2006; 4 (2): 95-103
in English | IMEMR | ID: emr-164736

ABSTRACT

The cDNA from the mycoparasitic fungus Trichoderma atroviride PTCC5220 encoding a 42 kDa chitinase [Chit42] was isolated. The nucleotide sequence of the cDNA fragment as having a 1263 bp open reading frame that encodes a 421 amino acid polypeptide, and a high homology was found with other reported Chit42 belonging to the Trichoderma sp. The 22 amino acid N-terminal sequence is a putative signal pep-tide for the possible secretion of the protein. The protein has been expressed and secreted as a mature form in Escherichia coll BL21[DE3] using the pelB leader sequence. The E. coll strain expressed Chit42 in an active form and secreted the protein into the medium. This recombinant chitinase has been shown to have inhibitory activity on mycelial growth and also, lytic activity on the cell wall of Rhizoctonia solani [AG2-2], causal agent of root rot in sugar beet in vitro. Expressed chitinase was optimally active at pH 5 and at 40°C. It is thermally stable at 60°C for more than 120 min at pH5

8.
IJB-Iranian Journal of Biotechnology. 2005; 3 (4): 204-215
in English | IMEMR | ID: emr-70807

ABSTRACT

The genomic and cDNA clones encoding cellobiohydrolase II [cbhII] have been isolated and sequenced from a native Iranian isolate of Trichoderma parceramosum, a high cellulolytic enzymes producer isolate. This represents the first report of cbhII gene from this organism. Comparison of genomic and cDNA sequences indicates this gene contains three short introns and also an open reading frame coding for a protein of 470 amino acids. The deduced amino acid sequence includes a putative signal peptide, cellulose binding domain, linker region, and catalytic domain. Homology between this sequence and other reported Trichoderma CBHII proteins and also structural prediction of this enzyme are discussed. The coding sequence of cbhII gene was cloned in pPIC9 expression vector and expressed in Pichia pastoris GS115. The expression was confirmed by Northern dot blot, RT-PCR and enzyme activity staining


Subject(s)
Pichia/genetics , Cloning, Molecular
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